Open Access
Table 2
Identified AMF OTU at the species or genus level
| Sample | Identification using ITS1 region | Identification using ITS2 region | ||
|---|---|---|---|---|
| at the genus level, number of OTU | at the species level, number of OTU, sequence numbers | at the genus level, number of OTU | at the species level, number of OTU, sequence numbers | |
| 145Te | Claroideoglo mus, 2 | C. claroideum, 1, MT447955; C. sp., MT447954 | Claroideoglomus, 2 | C. claroideum, 1, MT451854; C. sp., MT451850 |
| Rhizophagus, 4 | R. irregularis, 3, MT447980-MT447982; R. sp., MT447992 | Entrophospora, 1 | E. infrequens, 1, MT451858 | |
| Acaulospora, 1 | Ac. sp., MT447948 | |||
| only at the family level, 5 | Glomeraceae sp., MT447993- MT447997 | only at the family level, 0 | ||
| Total OTU in 145Te | 7 | 4 (57%) | 3 | 2 (67%) |
| 176Te | Archaeospora, 2 | Ar. spainiae, 2, MT447949-MT447950 | Claroideoglomus, 3 | C. claroideum, 3, MT451851-MT451853 |
| Rhizophagus, 9 | R. irregularis, 3, MT447983- MT447985; R. sp., MT448000-MT448004 | Glomus, 1 | Gl. indicum, 1, MT451865 | |
| Diversispora, 3 | Di. versiformis, 3, MT447951-MT447953 | Entrophospora, 3 | E. infrequens, 3, MT451860- MT451862 | |
| Funneliformis, 3 | F. mosseae, 3, MT447956- MT447958 | Paraglomus, 3 | P. laccatum, 3, MT451868- MT451870 | |
| Paraglomus, 3 | P. laccatum, 3, MT448008- MT448010 | Scutellospora, 1 | Sc. sp., MT451849 | |
| Septoglomus, 28 | Se. sp., MT448012- MT448039 | |||
| Scutellospora, 3 | Sc. sp., MT408934-MT408936 | |||
| Dominikia, 5 | Do. sp., MT447960-MT447964 | |||
| only at the family level, 6 | Glomeraceae sp., MT447975- MT447978, MT447998- MT447999 | only at the family level, 0 | ||
| Total OTU in 176Te | 56 | 14 (25%) | 11 | 10 (91%) |
| 189Te | Rhizophagus, 7 | R. irregularis, 1, MT447979; R. sp., MT447986-MT447991 | Claroideoglomus, 1 | C. claroideum, 1, MT451855 |
| Paraglomus, 1 | P. laccatum, 1, MT448011 | Entrophospora, 3 | E. infrequens, 3, MT451859, MT451863- MT451864 | |
| Dominikia, 4 | Do. sp., MT447965- MT447968 | Glomus, 2 | Gl. indicum, 2, MT451866-MT451867 | |
| only at the family level, 6 | Glomeraceae sp., MT447969-MT447974 | only at the family level, 0 | ||
| Total OTU in 189Te | 12 | 2 (17%) | 6 | 6 (100%) |
| Average OTU for sample | 25.0 | 6.7 (27%) | 6.7 | 6.0 (90%) |
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